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Issue 1138, Issue 1139, Issue 1141
This commit is contained in:
Thomas Nagy
parent
37854f57a2
commit
9004b1fd95
142
waflib/extras/run_do_script.py
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142
waflib/extras/run_do_script.py
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#!/usr/bin/env python
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# encoding: utf-8
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# Hans-Martin von Gaudecker, 2012
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"""
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Run a Stata do-file in the directory specified by **ctx.bldnode**. The
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first and only argument will be the name of the do-file (no extension),
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which can be accessed inside the do-file by the local macro `1'. Useful
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for keeping a log file.
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The tool uses the log-file that is automatically kept by Stata only
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for error-catching purposes, it will be destroyed if the task finished
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without error. In case of an error, you can inspect it as **do_file.log**
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in the **ctx.bldnode** directory.
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Note that Stata will not return an error code if it exits abnormally --
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catching errors relies on parsing the log-file mentioned before. Should
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the parser behave incorrectly please send an email to hmgaudecker [at] gmail.
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**Careful**
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The tool will not work if multiple do-files of the same name---but in
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different directories---are run at the same time! Avoid this situation.
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Usage:
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ctx(features='run_do_file',
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source='some_file.do',
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target=['some_table.tex', 'some_figure.eps'],
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deps='some_data.csv')
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"""
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import os, re, sys
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from waflib import Task, TaskGen, Logs
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if sys.platform == 'darwin':
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STATA_COMMANDS = ['Stata64MP', 'StataMP',
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'Stata64SE', 'StataSE',
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'Stata64', 'Stata']
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STATAFLAGS = '-e -q do'
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STATAENCODING = 'MacRoman'
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elif sys.platform.startswith('linux'):
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STATA_COMMANDS = ['stata-mp', 'stata-se', 'stata']
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STATAFLAGS = '-b -q do'
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# Not sure whether this is correct...
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STATAENCODING = 'Latin-1'
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elif sys.platform.lower().startswith('win'):
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STATA_COMMANDS = ['StataMP-64', 'StataMP-ia',
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'StataMP', 'StataSE-64',
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'StataSE-ia', 'StataSE',
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'Stata-64', 'Stata-ia',
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'Stata.e', 'WMPSTATA',
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'WSESTATA', 'WSTATA']
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STATAFLAGS = '/e do'
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STATAENCODING = 'Latin-1'
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else:
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raise Exception("Unknown sys.platform: %s " % sys.platform)
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def configure(ctx):
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ctx.find_program(STATA_COMMANDS, var='STATACMD', errmsg="""\n
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No Stata executable found!\n\n
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If Stata is needed:\n
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1) Check the settings of your system path.
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2) Note we are looking for Stata executables called: %s
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If yours has a different name, please report to hmgaudecker [at] gmail\n
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Else:\n
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Do not load the 'run_do_file' tool in the main wscript.\n\n""" % STATA_COMMANDS)
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ctx.env.STATAFLAGS = STATAFLAGS
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ctx.env.STATAENCODING = STATAENCODING
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@Task.update_outputs
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class run_do_file_base(Task.Task):
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"""Run a Stata do-file from the bldnode directory."""
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run_str = '"${STATACMD}" ${STATAFLAGS} "${SRC[0].abspath()}" "${DOFILETRUNK}"'
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shell = True
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class run_do_file(run_do_file_base):
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"""Use the log-file automatically kept by Stata for error-catching.
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Erase it if the task finished without error. If not, it will show
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up as do_file.log in the bldnode directory.
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"""
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def run(self):
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run_do_file_base.run(self)
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ret, log_tail = self.check_erase_log_file()
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if ret:
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Logs.error("""Running Stata on %s failed with code %r.\n\nCheck the log file %s, last 10 lines\n\n%s\n\n\n""" % (
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self.inputs[0].nice_path(), ret, self.env.LOGFILEPATH, log_tail))
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return ret
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def check_erase_log_file(self):
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"""Parse Stata's default log file and erase it if everything okay.
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Parser is based on Brendan Halpin's shell script found here:
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http://teaching.sociology.ul.ie/bhalpin/wordpress/?p=122
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"""
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if sys.version_info.major >= 3:
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kwargs = {'file': self.env.LOGFILEPATH, 'mode': 'r', 'encoding': self.env.STATAENCODING}
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else:
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kwargs = {'name': self.env.LOGFILEPATH, 'mode': 'r'}
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with open(**kwargs) as log:
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log_tail = log.readlines()[-10:]
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for line in log_tail:
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error_found = re.match("r\(([0-9]+)\)", line)
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if error_found:
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return error_found.group(1), ''.join(log_tail)
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else:
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pass
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# Only end up here if the parser did not identify an error.
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os.remove(self.env.LOGFILEPATH)
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return None, None
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@TaskGen.feature('run_do_file')
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@TaskGen.before_method('process_source')
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def apply_run_do_file(tg):
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"""Task generator customising the options etc. to call Stata in batch
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mode for running a do-file.
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"""
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# Convert sources and targets to nodes
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src_node = tg.path.find_resource(tg.source)
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tgt_nodes = [tg.path.find_or_declare(t) for t in tg.to_list(tg.target)]
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tsk = tg.create_task('run_do_file', src=src_node, tgt=tgt_nodes)
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tsk.env.DOFILETRUNK = os.path.splitext(src_node.name)[0]
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tsk.env.LOGFILEPATH = os.path.join(tg.bld.bldnode.abspath(), '%s.log' % (tsk.env.DOFILETRUNK))
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# dependencies (if the attribute 'deps' changes, trigger a recompilation)
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for x in tg.to_list(getattr(tg, 'deps', [])):
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node = tg.path.find_resource(x)
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if not node:
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tg.bld.fatal('Could not find dependency %r for running %r' % (x, src_node.nice_path()))
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tsk.dep_nodes.append(node)
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Logs.debug('deps: found dependencies %r for running %r' % (tsk.dep_nodes, src_node.nice_path()))
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# Bypass the execution of process_source by setting the source to an empty list
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tg.source = []
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110
waflib/extras/run_py_script.py
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110
waflib/extras/run_py_script.py
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#!/usr/bin/env python
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# encoding: utf-8
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# Hans-Martin von Gaudecker, 2012
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"""
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Run a Python script in the directory specified by **ctx.bldnode**.
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Select a Python version by specifying the **version** keyword for
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the task generator instance as integer 2 or 3. Default is 3.
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If the build environment has an attribute "PROJECT_PATHS" with
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a key "PROJECT_ROOT", its value will be appended to the PYTHONPATH.
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Same a string passed to the optional **add_to_pythonpath**
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keyword (appended after the PROJECT_ROOT).
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Usage:
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ctx(features='run_py_script', version=3,
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source='some_script.py',
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target=['some_table.tex', 'some_figure.eps'],
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deps='some_data.csv',
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add_to_pythonpath='src/some/library')
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"""
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import os, re
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from waflib import Task, TaskGen, Logs
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def configure(ctx):
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"""TODO: Needs updating for Windows once
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"PEP 397":http://www.python.org/dev/peps/pep-0397/ is settled.
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"""
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# Counter how many Python interpreters are found
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cnt = 0
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conf.find_program('python', var='PY2CMD', mandatory=False)
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conf.find_program('python3', var='PY3CMD', mandatory=False)
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if not conf.env.PY2CMD and not conf.env.PY3CMD:
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ctx.fatal("No Python interpreter found!")
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@Task.update_outputs
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class run_py_2_script(Task.Task):
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"""Run a Python 2 script."""
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run_str = '${PY2CMD} ${SRC[0].abspath()}'
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shell=True
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@Task.update_outputs
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class run_py_3_script(Task.Task):
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"""Run a Python 3 script."""
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run_str = '${PY3CMD} ${SRC[0].abspath()}'
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shell=True
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@TaskGen.feature('run_py_script')
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@TaskGen.before_method('process_source')
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def apply_run_py_script(tg):
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"""Task generator for running either Python 2 or Python 3 on a single
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script.
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Attributes:
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* source -- A **single** source node or string. (required)
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* target -- A single target or list of targets (nodes or strings).
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* deps -- A single dependency or list of dependencies (nodes or strings)
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* add_to_pythonpath -- A string that will be appended to the PYTHONPATH environment variable.
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If the build environment has an attribute "PROJECT_PATHS" with
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a key "PROJECT_ROOT", its value will be appended to the PYTHONPATH.
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"""
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# Set the Python version to use, default to 3.
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v = getattr(tg, 'version', 3)
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if v not in (2, 3): raise ValueError("Specify the 'version' attribute for run_py_script task generator as integer 2 or 3.\n Got: %s" %v)
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# Convert sources and targets to nodes
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src_node = tg.path.find_resource(tg.source)
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tgt_nodes = [tg.path.find_or_declare(t) for t in tg.to_list(tg.target)]
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# Create the task.
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tsk = tg.create_task('run_py_%d_script' %v, src=src_node, tgt=tgt_nodes)
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# custom execution environment
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# TODO use a list and os.sep.join(lst) at the end instead of concatenating strings
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tsk.env.env = dict(os.environ)
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tsk.env.env['PYTHONPATH'] = tsk.env.env.get('PYTHONPATH', '')
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project_paths = getattr(tsk.env, 'PROJECT_PATHS', None)
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if project_paths and 'PROJECT_ROOT' in project_paths:
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tsk.env.env['PYTHONPATH'] += os.pathsep + project_paths['PROJECT_ROOT'].abspath()
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if getattr(tg, 'add_to_pythonpath', None):
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tsk.env.env['PYTHONPATH'] += os.pathsep + tg.add_to_pythonpath
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# Clean up the PYTHONPATH -- replace double occurrences of path separator
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tsk.env.env['PYTHONPATH'] = re.sub(os.pathsep + '+', os.pathsep, tsk.env.env['PYTHONPATH'])
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# Clean up the PYTHONPATH -- doesn't like starting with path separator
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if tsk.env.env['PYTHONPATH'].startswith(os.pathsep):
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tsk.env.env['PYTHONPATH'] = tsk.env.env['PYTHONPATH'][1:]
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# dependencies (if the attribute 'deps' changes, trigger a recompilation)
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for x in tg.to_list(getattr(tg, 'deps', [])):
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node = tg.path.find_resource(x)
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if not node:
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tg.bld.fatal('Could not find dependency %r for running %r' % (x, src_node.nice_path()))
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tsk.dep_nodes.append(node)
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Logs.debug('deps: found dependencies %r for running %r' % (tsk.dep_nodes, src_node.nice_path()))
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# Bypass the execution of process_source by setting the source to an empty list
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tg.source = []
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88
waflib/extras/run_r_script.py
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88
waflib/extras/run_r_script.py
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#!/usr/bin/env python
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# encoding: utf-8
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# Hans-Martin von Gaudecker, 2012
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"""
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Run a R script in the directory specified by **ctx.bldnode**.
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For error-catching purposes, keep an own log-file that is destroyed if the
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task finished without error. If not, it will show up as rscript_[index].log
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in the bldnode directory.
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Usage:
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ctx(features='run_r_script',
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source='some_script.r',
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target=['some_table.tex', 'some_figure.eps'],
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deps='some_data.csv')
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"""
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import os, re, sys
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from waflib import Task, TaskGen, Logs
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R_COMMANDS = ['RTerm', 'R', 'r']
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def configure(ctx):
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ctx.find_program(R_COMMANDS, var='RCMD', errmsg = """\n
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No R executable found!\n\n
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If R is needed:\n
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1) Check the settings of your system path.
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2) Note we are looking for R executables called: %s
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If yours has a different name, please report to hmgaudecker [at] gmail\n
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Else:\n
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Do not load the 'run_r_script' tool in the main wscript.\n\n""" % R_COMMANDS)
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ctx.env.RFLAGS = 'CMD BATCH --slave'
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@Task.update_outputs
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class run_r_script_base(Task.Task):
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"""Run a R script."""
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run_str = '"${RCMD}" ${RFLAGS} "${SRC[0].abspath()}" "${LOGFILEPATH}"'
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shell = True
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class run_r_script(run_r_script_base):
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"""Erase the R overall log file if everything went okay, else raise an
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error and print its 10 last lines.
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"""
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def run(self):
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ret = run_r_script_base.run(self)
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logfile = self.env.LOGFILEPATH
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if ret:
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mode = 'r'
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if sys.version_info.major >= 3:
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mode = 'rb'
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with open(logfile, mode=mode) as f:
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tail = f.readlines()[-10:]
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Logs.error("""Running R on %s returned the error %r\n\nCheck the log file %s, last 10 lines\n\n%s\n\n\n""" % (
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self.inputs[0].nice_path(), ret, logfile, '\n'.join(tail)))
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else:
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os.remove(logfile)
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return ret
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@TaskGen.feature('run_r_script')
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@TaskGen.before_method('process_source')
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def apply_run_r_script(tg):
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"""Task generator customising the options etc. to call R in batch
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mode for running a R script.
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"""
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# Convert sources and targets to nodes
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src_node = tg.path.find_resource(tg.source)
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tgt_nodes = [tg.path.find_or_declare(t) for t in tg.to_list(tg.target)]
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tsk = tg.create_task('run_r_script', src=src_node, tgt=tgt_nodes)
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tsk.env.LOGFILEPATH = os.path.join(tg.bld.bldnode.abspath(), '%s_%d.log' % (os.path.splitext(src_node.name)[0], tg.idx))
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# dependencies (if the attribute 'deps' changes, trigger a recompilation)
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for x in tg.to_list(getattr(tg, 'deps', [])):
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node = tg.path.find_resource(x)
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if not node:
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tg.bld.fatal('Could not find dependency %r for running %r' % (x, src_node.nice_path()))
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tsk.dep_nodes.append(node)
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Logs.debug('deps: found dependencies %r for running %r' % (tsk.dep_nodes, src_node.nice_path()))
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# Bypass the execution of process_source by setting the source to an empty list
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tg.source = []
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